Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015801098.1_cds_XP_016472914.1_6483
CDS Infomation

[gene=LOC107794879] [db_xref=GeneID:107794879] [protein=F-box protein At5g07610-like] [protein_id=XP_016472914.1] [location=complement(join(17099..18267,20274..20610))] [gbkey=CDS]
Sequence

ATGACTATTAAGTTGGTGGTGGGTGAGGGTACTTTAAATATCGTTAGCGCGTACGCACCA
CAAGCAGGCTTGGATGAGGATATTAAAAGACAATTTTGGGAGGGGTTGGATGAGATTGTT
CGTAGTATACCTCCTTCTGAGAGGTTATTCATAGGAGGAGATTTCAATGGTCATATTGGT
TTATCTGCATGTGGGTACACTGAGGTGCATGGCGGATTTGGTTTCGGAGAGCGGAACGGA
GGGGGCATTGCGTTGTTGGACTTTGCCAAGGCTTTCGATCTAGTCATTGCAAACTCGAGT
TTTACGAAGCGAGATGAACATTTGATTACTTACCAAATGTTCTCAAATGAAGGACTATTG
ACAGAGATCCTCCTTCGTCTGCCTGTAAAATCACTCGTTCAATGCAAATGCATATCGAAA
AAATGGCGATCTTTAATCTCTAGTCCACACTTCACACGCCTCAGAATCCCCTATTTCAGC
CCTGCTCGTGGCATTTTCTTGTACCATTCTTCATTTTTCACCAACCCTTTTCACAAATTT
GTGTCTTTTAACTTAGAAAATCCAATTCCAACACCATTCCTAAAGTTCCCTTTTGCACAA
CATGACTCTCCTAAAATCTTTATTATGCAATCTTGCAATGGACTTTTGCTTTGTTGTACA
AAACATAATCCATTTACATTTAATGAGGACTACTACATATTCAACCCGACTACTCGACAA
TTCATCACACTTCCTAGACCAGGAGGGGATGTAATAGGGATGAGTTTAGCCTTTGATCCG
TGGAAATCGCCTCATTACAAAGTCATCTGTCTCCGAATTTCTGAACTGGAACCTGAGAAC
GACCAGATTGAGATTTACTCATCCGAATCAAAGAAGTGGAGAGTCTCTGGTCCATCATTC
CCTAAACGTTACGATATAAGTTTTAGACATGGACTAGTTTACTGGAATGGAGCCATTTAT
GTGTCATATATCAAGCGTTTCAATTTGGAACAAGAAAAGTTTGAAATTTTTCCCATGCCT
AATTGCTTTGATGGACAAGAGTGGGATAAAGAGGATCATAGGATTATCTATTTTGGAGAG
TCTTATGGCTATTTGCACTTAATACAAGTGAATCGCCAGAAACTAACTTTGTACAATATT
TACGAGAAGAAAAATGATGGTACTGAGTGGTTCTTGAAATACGAGGTGAATGTTGAAGAT
GTTGTGTCAGGATATCCTAGGATGATTCGACGTTATCTTGAGCCAACAGATTTTCATTAC
TATGCAATGGCTGTGGTTAATGTTGTAAGGGGAGAGAAAGAGGAGGATACTTTCTTGGTT
TTGCATATTCCAGAACTGGCCATTTTACGTTACAATTTGGCAGATAAGTCATTTCATATG
CTCTGTGATTTTGATAGGGGCCAAGATAAGGGCATTCTCGAGGAATTTGATGAAGAACTT
GCTGTGTGTCTTCATTTTCATAGCTCAAGCACTTATCAATATATTGAATCTACCTATTAT
TGGTAA

Peptide Sequence

PEP ID

XP_016472914.1
PEP Infomation

PREDICTED: F-box protein At5g07610-like [Nicotiana tabacum]
Sequence

MTIKLVVGEGTLNIVSAYAPQAGLDEDIKRQFWEGLDEIVRSIPPSERLFIGGDFNGHIG
LSACGYTEVHGGFGFGERNGGGIALLDFAKAFDLVIANSSFTKRDEHLITYQMFSNEGLL
TEILLRLPVKSLVQCKCISKKWRSLISSPHFTRLRIPYFSPARGIFLYHSSFFTNPFHKF
VSFNLENPIPTPFLKFPFAQHDSPKIFIMQSCNGLLLCCTKHNPFTFNEDYYIFNPTTRQ
FITLPRPGGDVIGMSLAFDPWKSPHYKVICLRISELEPENDQIEIYSSESKKWRVSGPSF
PKRYDISFRHGLVYWNGAIYVSYIKRFNLEQEKFEIFPMPNCFDGQEWDKEDHRIIYFGE
SYGYLHLIQVNRQKLTLYNIYEKKNDGTEWFLKYEVNVEDVVSGYPRMIRRYLEPTDFHY
YAMAVVNVVRGEKEEDTFLVLHIPELAILRYNLADKSFHMLCDFDRGQDKGILEEFDEEL
AVCLHFHSSSTYQYIESTYYW

Transcript Sequence

Gene sequence data has not been registered.